Rigor and reproducibility in genetics and genomics : peer-reviewed, published, cited /
"Rigor and Reproducibility in Genetics and Genomics: Peer-reviewed, Published, Cited provides a full methodological and statistical overview for researchers, clinicians, students, and post-doctoral fellows conducting genetic and genomic research. Here, active geneticists, clinicians, and bioinf...
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| Other Authors: | , |
| Format: | eBook |
| Language: | English |
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London ; San Diego, CA :
Academic Press, an imprint of Elsevier,
[2024]
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| Series: | Translational and applied genomics series.
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| Subjects: | |
| Online Access: | Connect to the full text of this electronic book |
Table of Contents:
- Introduction. Rigor and reproducibility in genetic research and the effects on scientific reporting and public discourse / Monika H.M. Schmidt and Douglas F. Dluzen
- Unveiling the hidden curriculum : developing rigor and reproducibility values through teaching and mentorship / Marina E. Tourlakis
- Genotyping. Genome-wide association studies (GWAS) : what are they, when to use them?
- GWAS in the learning environment / Amy L. Stark
- Polygenic risk scores and comparative genomics : best practices and statistical considerations / Sally I-Chun Kuo and Fazil Aliev
- Sequence analysis and genomics in the classroom / Rebecca C. Burgess, Rivka Glaser, and Kimberly Pause Tucker
- Classroom to career : implementation considerations for engaging students with meaningful DNA sequencing learning opportunities / Charles Wray
- Next-generation sequencing & gene expression. Review of gene expression using microarray and RNA-seq / Ana B. Villaseñor-Altamirano, Yalbi Itzel Balderas-Martinez, and Alejandra Medina-Rivera
- Guidelines and important considerations for 'omics-level studies / Francesca Luca and Athma A. Pai
- Rigor and reproducibility of RNA sequencing analysis / Dominik Buschmann, Tom Driedonks, Yiyao Huang, Juan Pablo Tosar, Andrey Turchinovich, and Kenneth W. Witwer
- Validation of gene expression by quantitative PCR / Arundhati Das, Devojyoti Das, and Amaresh C. Panda
- Epigenetic analyses. Best practices for epigenome-wide DNA modification data collection and analysis / Joseph Kochmanski and Alison I. Berntein
- Best practices for the ATAC-seq assay and its data analysis / Haibo Liu, Rui Li, Kai Hu, Jianhong Ou, Magnolia Pak, Michael R. Green, and Lihua Julie Zhu
- Best practice for ChIP-seq and its data analysis / Huayun Hou, Matthew Hudson, and Minggao Liang
- A practical guide for essential analyses of Hi-C data / Yu Liu and Erica M Hildebrand
- Epigenetics in the classroom / Khadijah Makky
- Gene editing technologies. Genome editing technologies / Dana Vera Foss and Alexis Leigh Norris
- Genetic modification of mice using CRISPR-Cas9 : best practices and practical concepts explained / Vishnu Hosur, Benjamin E. Low, and Michael V. Wiles
- CRISPR classroom activities and case studies / TyAnna L. Lovato and Richard M. Cripps.