Functional proteomics : methods and protocols /
| Other Authors: | , , |
|---|---|
| Format: | Book |
| Language: | English |
| Published: |
Totowa, N.J. :
Humana Press,
[2008]
|
| Series: | Methods in molecular biology (Clifton, N.J.) ;
484. |
| Subjects: |
Table of Contents:
- A brief summary of the different types of mass spectrometers used in proteomics
- Experimental setups and considerations to study microbial interactions
- Plant proteomics
- Methods for human CD8+ T lymphocyte proteome analysis
- Label-free proteomics of serum
- Flow cytometric analysis of cell membrane microparticles
- Exosomes
- Toward a full characterization of the human 20S proteasome subunits and their isoforms by a combination of proteomic approaches
- Free-flow electrophoresis of the human urinary proteome
- Versatile screening for binary protein-protein interactions by yeast two-hybrid mating
- Native fractionation : isolation of native membrane-bound protein complexes from porcine rod outer segments using isopycnic density gradient centrifugation
- Mapping the signaling pathways by functional interaction proteomics
- Selection of recombinant antibodies by eukaryotic ribosome display
- Production of protein arrays by cell-free systems
- Nondenaturing mass spectrometry to study noncovalent protein/protein and protein/ligand complexes : technical aspects and application to the determination of binding stoichiometries
- Protein processing characterized by a gel-free proteomics approach
- Identification and characterization of N-glycosylated proteins using proteomics
- Data standards and controlled vocabularies for proteomics
- The PRIDE proteomics identifications database : data submission, query, and dataset comparison
- Searching the protein interaction space through the MINT database
- PepSeeker : mining information from proteomic data
- Toward high-throughput and reliable peptide identification via MS/MS spectra
- MassSorter : peptide mass fingerprinting data analysis
- Database similarity searches
- Protein multiple sequence alignment
- Discovering biomedical knowledge from the literature
- Protein subcellular localization prediction using artificial intelligence technology
- Protein functional annotation by homology
- Designability and disease
- Prism : protein-protein interaction prediction by structural matching
- Prediction of protein interaction based on similarity of phylogenetic trees
- Large multiprotein structures modeling and simulation : the need for mesoscopic models
- Dynamic pathway modeling of signal transduction networks : a domain-oriented approach