Ubiquitin-proteasome protocols /

Bibliographic Details
Other Authors: Patterson, Cam, Cyr, Douglas M.
Format: Book
Language:English
Published: Totowa, N.J. : Humana Press, [2005]
Series:Methods in molecular biology (Clifton, N.J.) ; v. 301.
Subjects:
Table of Contents:
  • Small-molecule inhibitors of proteasome activity
  • Purification of E1 and E1-like enzymes
  • Assays for RING family ubiquitin ligases
  • Ubiquitin chain synthesis
  • Purification of proteasomes, proteasome subcomplexes, and proteasome-associated proteins from budding yeast
  • Recognition and processing of misfolded proteins by PA700, the 19S regulatory complex of the 26S proteasome
  • Cell-free assay for ubiquitin-independent proteasomal protein degradation
  • Assays of proteasome-dependent cleavage products
  • Identification of components of protein complexes
  • Mass spectrometric determination of protein ubiquitination
  • Reconstitution of endoplasmic reticulum-associated degradation using yeast membranes and cytosol
  • Reticulocyte lysate as a model system to study endoplasmic reticulum membrane protein degradation
  • Deubiquitinating enzyme purifucation, assay inhibitors, and characterization
  • Measuring ubiquitin conjugation in cells
  • Assays for proteasome assembly and maturation
  • N-terminal ubiquitination
  • Quantitating defective ribosome products
  • Endoplasmic reticulum-associated protein quality control and degradation : screen for ERAD mutants after ethylmethane sulfonate mutagenesis-- Endoplasmic reticulum-associated protein quality control and degradation : genome wide screen for ERAD components
  • Cystic fibrosis transmembrane conductance regulator as a model substrate to study endoplasmic reticulum protein quality control in mammalian cells
  • Aggresome formation
  • Detection of sumoylated proteins
  • Proteasome inhibitors in cancer therapy-- Parkinson's disease : assays for the ubiquitin ligase activity of neural Parkin