The analysis of gene expression data : methods and software /

Bibliographic Details
Other Authors: Parmigiani, G. (Giovanni)
Format: Book
Language:English
Published: New York : Springer, [2003]
Series:Statistics for biology and health.
Subjects:
Table of Contents:
  • Analysis of gene expression data : an overview of methods and software
  • Visualization and annotation of genomic experiments
  • Bioconductor R packages for exploratory analysis and normalization of cDNA microarray data
  • An R package for analysis of affymetrix oligonucleotide arrays
  • DNA-chip analyzer (dCHIP)
  • Expression profiler
  • An S-plus library for the analysis and visualization of differential expression
  • DRAGON and DRAGON view : methods for the annotation, analysis, and visualization of large-scale gene expression data
  • SNOMAD : biologist-friendly web tools for the standardization and NOrmalization of microarray data
  • Microarray analysis using the MicroArray explorer
  • Parametric empirical bayes methods for microarrays
  • SAM thresholding and false discovery rates for detecting differential gene expression in DNA microarrays
  • Adaptive gene picking with microarray data : detecting important low abundance signals
  • MAANOVA : a software package for the analysis of spotted cDNA microarray experiments
  • GeneClust
  • POE : statistical methods for qualitative analysis of gene expression
  • Bayesian decomposition
  • Bayesian clustering of gene expression dynamics
  • Relevance networks : a first step toward finding genetic regulatory networks within microarray data