Pattern discovery in biomolecular data : tools, techniques, and applications /

Bibliographic Details
Other Authors: Wang, Jason T. L., Shapiro, Bruce A., Shasha, Dennis Elliott
Format: Book
Language:English
Published: New York : Oxford University, 1999.
Subjects:

MARC

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245 0 0 |a Pattern discovery in biomolecular data :  |b tools, techniques, and applications /  |c edited by Jason T.L. Wang, Bruce A. Shapiro, Dennis Shasha. 
264 1 |a New York :  |b Oxford University,  |c 1999. 
300 |a xix, 251 pages :  |b illustrations ;  |c 25 cm. 
336 |a text  |2 rdacontent  |b txt 
337 |a unmediated  |2 rdamedia 
338 |a volume  |2 rdacarrier  |b nc 
504 |a Includes bibliographical references (pages 226-247) and index. 
505 0 |a Pt. 1. Finding patterns in sequences -- Discovering patterns in DNA sequences by the algorithmic significance method / Aleksandar Milosavljević -- Encoding schemes -- Algorithms for minimal length encoding -- Algorithmic significance -- Applications -- Future work and generalizations -- Assembling blocks / Jorja G. Henikoff -- Algorithmic techniques -- Future work and generalizations -- MEME, MAST, and meta-MEME: new tools for motif discovery in protein sequences / Timothy L. Bailey ... [et al.] -- Software for finding sequence motifs -- Methods -- Results -- Discussion -- Pattern discovery and classification in biosequences / Jason T.L. Wang ... [et al.] -- Pattern discovery in protein sequences -- Classification of DNA sequences -- Generalizations and future work -- Pt. 2. Finding patterns in 3D structures -- Motif discovery in protein structure databases / Janice Glasgow, Evan Steeg, Suzanne Fortier -- Protein motifs -- Computational approaches to knowledge discovery -- Assessing protein motifs and discovery methods -- Issues in protein motif discovery -- Conclusion -- Systematic detection of protein structural motifs / Kentaro Tomii, Minoru Kanehisa -- Structural building blocks -- Symbol string representation of 3D structures -- Detection of structural motifs by structure comparisons -- Detection of structural motifs by sequence comparisons -- Discussion and future directions -- Representation and matching of small flexible molecules in large databases of 3D molecular information / Isidore Rigoutsos ... [et al.] -- The representation scheme -- Storage/retrieval and threading -- The algorithm -- Experimental results -- Discussion -- Pt. 3. System components for discovery -- A framework for biological pattern discovery on networks of workstations / Bin Li, Dennis Shasha, Jason T.L. Wang -- Biological pattern discovery -- Biological pattern discovery framework -- Parallel computing on networks of workstations -- Parallel E-dag traversal in PLinda -- Discovering concepts in structural data / Diane J. Cook, Lawrence B. Holder, Gehad Galal -- Algorithmic techniques -- Future work and generalizations -- Overview: a system for tracking and managing the results from sequence comparison programs / David P. Yee ... [et al.] -- Related work -- Molecular biology applications and databases -- Algorithmic techniques -- The overview information model -- Biological experiments and applications: user scenarios -- Future work and generalizations -- RNA structure analysis: a multifaceted approach / Bruce A. Shapiro ... [et al.] -- A brief introduction to RNA -- RNA folding problem -- The genetic algorithm: an overview -- The structurelab workbench -- Structurelab in use -- Future directions and challenges. 
650 2 |a Base Sequence. 
650 2 |a Amino Acid Sequence. 
650 2 |a Automation  |x methods. 
650 2 |a Information Storage and Retrieval. 
650 2 |a Pattern Recognition. 
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700 1 |a Shapiro, Bruce A. 
700 1 |a Shasha, Dennis Elliott. 
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