Table of Contents:
  • Speeding up the DIALIGN multiple alignment program by using the 'Greedy Alignment of BIOlogical Sequences LIBrary' (GABIOS-LIB) / Saïd Abdeddaïm, Burkhard Morgenstern
  • GeMCore, a knowledge base dedicated to mapping mammalian genomes / Gisèle Bronner, Bruno Spataro, Christian Gautier [and others]
  • Optimal agreement supertrees / David Bryant
  • Segmentation by maximal predictive partitioning according to composition biases / Laurent Guéguen
  • Can we have confidence in a tree representation? / Alain Guénoche, Henri Garreta
  • Bayesian approach to DNA segmentation into regions with different average nucleotide composition / Vsevolod Makeev, Vasily Ramensky, Mikhail Gelfand [and others]
  • Exact and asymptotic distribution of the local score of one i.i.d. random sequence / Sabine Mercier, Dominique Cellier, François Charlot [and others]
  • Phylogenetic reconstruction algorithms based on weighted 4-trees / Vincent Ranwez, Olivier Gascuel
  • Computational complexity of word counting / Mireille Régnier
  • EuGène: an eukaryotic gene finder that combines several sources of evidence / Thomas Schiex, Annick Moisan, Pierre Rouzé
  • Tree reconstruction via a closure operation on partial splits / Charles Semple, Mike Steel
  • InterDB, a prediction-oriented protein interaction database for C. elegans / Nicolas Thierry-Mieg, Laurent Trilling
  • Application of regulatory sequence analysis and metabolic network analysis to the interpretation of gene expression data / Jacques van Helden, David Gilbert, Lorenz Wernisch [and others].