The role of the N-terminal domain of T4 gene 32 protein in the cooperatively bound protein - single-stranded nucleic acid complex /

a possible kinetic defect in cooperative binding by the B-

Bibliographic Details
Main Author: Villemain, Jana Lynn, 1967-
Format: Thesis Book
Language:English
Published: [Place of publication not identified] : [publisher not identified] ; 1995.
Subjects:
Online Access:http://proxy.library.tamu.edu/login?url=http://proquest.umi.com/pqdweb?did=742745221&sid=1&Fmt=2&clientId=2945&RQT=309&VName=PQD
Link to OAKTrust copy
Description
Summary:a possible kinetic defect in cooperative binding by the B-
ability of the mutant protein to bind the pairing substrate.
accounted for by a simple loss of binding affinity suggesting
acids by gp32. However, previous characterization of the
complexes in a functionally significant manner. More
concentration was assessed and compared to the ability of the
conditions reveal significantly shorter lifetimes of mutant
cooperative gp32-ssDNA complex.
domain mutants, R4K, R4Q, R4T, R4G, and K3A to poly(A) are
domain mutants. Fluorescence stopped-flow kinetic
equilibrium binding properties of wild-type (wt), and five B-
gp32 to ss nucleic acids which state that only cooperativity
highly cooperative binding to single-stranded (ss) nucleic
importantly, correlation of kinetic and equilibrium binding
inconsistent with simple models of cooperative binding by
less in most cases for the B-domain mutants than could be
measurements of the NaCi-induced rate of dissociation from
modulates the kinetic stability of cooperative gp32-ssDNA
mutant proteins to saturate the homologous pairing substrate,
mutant, the ability of the proteins to stimulate the in vitro
mutants were found to bind cooperatively to ss nucleic acids,
poly(A) for R4K, R4Q, and K3A gp32s over a range of solution
protein-nucleic complexes suggesting that the B-domain
results for these mutant proteins allow us for the first time
should be affected by mutations in this domain. All five
significant dependence of the functional efficiency on the
ssMl3mpl9 DNA under the same conditions. Results indicate a
The N-terminal 21 amino acids ("B"-domain) are essential for
to assign a functional role to the B-domain of gp32 in the
To further determine the nature of the deficiencies in each
uvsx-catalyzed homologous pairing assay as a function of gp32
with Kint affected significantly in all but the R4K mutant.
Yet, levels of stimulation in the pairing assay were still
Item Description:"Major Subject: Biochemistry".
In title, numerals are used.
Vita.
Physical Description:xv, 178 leaves : illustrations ; 28 cm.
Issued also on microfiche from University Microfilms Inc.
Bibliography:Includes bibliographical references.